PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10831.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 212aa MW: 23757.4 Da PI: 9.2772

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10831.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.6	3.8e-12	41	85	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++E+rRR+riN ++++Lr+++P + K++Ka+ L k++e +k+L Dr10831.1 41 HSQAEKRRRERINARLSTLRRMIPDS-----NKMDKASLLGKVIEQVKDL 85 99*********************7.....5***********99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MVDHTTSGLP SLVHPHGSSL HPCFEEVYEE EDGTASALRI HSQAEKRRRE RINARLSTLR 60 RMIPDSNKMD KASLLGKVIE QVKDLKRKAM DIAKLQTIPS ETNEVIVESK GDDKPIMYIK 120 ASICCDDRPD LLADLMQAFQ GLRVRAVKAD MISLGGRVRN VFVLCKKDSQ GNVCMNSLKD 180 SIKEVLARIA SSDVVSGKRQ RLMQSQYTNI SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	8e-42	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr10831.1