PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10843.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 224aa MW: 25566.3 Da PI: 9.1889

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10843.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.4	1.4e-27	25	79	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+pe+ e+F +av++LGG+++AtPk il++m+v+gLt++hvkS LQkYRl Dr10843.1 25 KQRMRWSPEMRECFERAVNHLGGPDRATPKGILKAMSVPGLTIAHVKSYLQKYRL 79 79****************************************************8 PP
2	Myb_DNA-binding	37.7	4.7e-12	27	78	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW++e e + +av+ lGg+ t+k I + m g+t ++ks++qky+ Dr10843.1 27 RMRWSPEMRECFERAVNHLGGPdraTPKGILKAMSvPGLTIAHVKSYLQKYR 78 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MLEPMPMVFR VEDMEECGVM GSLGKQRMRW SPEMRECFER AVNHLGGPDR ATPKGILKAM 60 SVPGLTIAHV KSYLQKYRLS KFVPESSDAG KLASRKFSEI LPNFSSTSRV QITEALQLHM 120 GGQLGHANQV QVQKHSKLRI DLQGRYLEKI TDEHCDFSSN CKPNKFCYPR KLNPFQKLVE 180 SKMNEQENYE AISSFSGIGS PEEEVQISNK RPRMTNYTHQ NIIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-40	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr10843.1