PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10899.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 329aa MW: 34513.5 Da PI: 8.7918

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10899.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.2	8.9e-39	79	137	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e alkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk++ Dr10899.1 79 EPALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRN 137 6789****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MVFSSVPAAY LDPPNWNQHQ PPDHQLPSGG GGGGGGGDHG QLPPPGIGGL NQEAAGMLGS 60 IRPGSMADRA RLAKMPPPEP ALKCPRCDST NTKFCYFNNY SLTQPRHFCK TCRRYWTRGG 120 ALRNVPVGGG CRRNKRNKGS GSSAKSSATS TGSSSASSTA TTTVSGAIPS NMPPMPQLPF 180 MTSLHPLADY APSGLGLNFT GIQGLDQVDY QVGSSSSVGL EQWRLHQQIQ QFPFFGGLEL 240 QPTPATVAAG LFPFDGDQVG VPDGPYAGQV HHKHSSSGLI TQLAAVKMED NSRGLSLQRQ 300 SLSMPGNDTY WSGNTASGWA SDVSGSSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	3e-45	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr10899.1