PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10913.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 694aa    MW: 78971.6 Da    PI: 5.9248
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10913.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.53.8e-1193196901374
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                l++lL++cA+avs++d ++a +lL+++++++sp+gd +qRla++f+++L+ar+a+++s++y+ + +++ s    s++l a++l+  ++P+ ++sh++aN+
  Dr10913.1 319 LRTLLIHCAQAVSADDRRNAGELLKQIRQHSSPHGDGTQRLAHCFANGLEARMAGTGSKIYNNFMSQRRS---ASDVLRAYQLYLSACPFKRISHFMANR 415
                6789*********************************************************999888887...99************************* PP

       GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                +Il+ +e+++r+Hi+Df+i +G+QWp+++q+La+Rp+gpp+lRiTg++ p++g   +e +eetg+rL+++A+++ +pfe+n  +a ++e++ le++++++
  Dr10913.1 416 TILDLAENQQRLHIVDFGIYYGFQWPCFMQTLANRPGGPPKLRITGIELPRPGfrPAELVEETGHRLTDYARSFXIPFEYNH-IAAKWETIXLEDIKIEK 514
                ****************************************************99999*************************.799************** PP

       GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                +E l+Vn+ ++++ l de+v+ +s+rd vL+l+++++P++++ +  +  +n++ F++rf eal ++salfd+le+++pre+ +r  +Er l+gr++ nv+
  Dr10913.1 515 DELLVVNCLYRMKXLADETVAADSPRDMVLNLIRRMNPDLFIQAITNGTYNAPFFVTRFREALFHFSALFDMLENNVPREDTQRFLIERDLFGRDALNVI 614
                **************************************************************************************************** PP

       GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                aceg er+er et+++W++r  +aGF+++pl+ + +  a + +r+v+ + +  +e+s++l++gWk+r  +++S+W+
  Dr10913.1 615 ACEGLERVERPETYKQWQARNLRAGFEQLPLKPELVRHAVSKVRTVYHKDFIXDEDSKWLLQGWKGRITYAISMWK 690
                ***********************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MVMGTGIRGS MPSFKHDELD FSFDQSSMNN GFSLRDEAQS LLNSSSLDDK LSGRESPDRY  60
PDVFNDIVLN YINRMLMEED MDEKLDIYHE PSALQAAEKS LYDVLGEKYP PSPDQPPLYT  120
DSESPGTDNS GNPYSSSHSS FQSSSSSSFS SSNSFSNVTQ GLEESLLNMG WVPDISMDSF  180
RKGVEEARKF LPSDDQLVIT LENSTGFVSS SSSSSSPPSV NQVKAEEKYG SRGRKNPHSD  240
DSDPEDQRSN KQSAVFYEEE TVRTPMFDDV LLCKFNCVAQ TQALRAAVER EASKGVVQDE  300
KQSKKTRGKK QTKKEVVDLR TLLIHCAQAV SADDRRNAGE LLKQIRQHSS PHGDGTQRLA  360
HCFANGLEAR MAGTGSKIYN NFMSQRRSAS DVLRAYQLYL SACPFKRISH FMANRTILDL  420
AENQQRLHIV DFGIYYGFQW PCFMQTLANR PGGPPKLRIT GIELPRPGFR PAELVEETGH  480
RLTDYARSFX IPFEYNHIAA KWETIXLEDI KIEKDELLVV NCLYRMKXLA DETVAADSPR  540
DMVLNLIRRM NPDLFIQAIT NGTYNAPFFV TRFREALFHF SALFDMLENN VPREDTQRFL  600
IERDLFGRDA LNVIACEGLE RVERPETYKQ WQARNLRAGF EQLPLKPELV RHAVSKVRTV  660
YHKDFIXDED SKWLLQGWKG RITYAISMWK PQSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein