PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10983.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 1448aa MW: 162177 Da PI: 6.4865

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10983.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	47.5	5.6e-15	10	58	1	48
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp 48 lppGfrF P+deelv++yL kkv++++ +++e + evd++++ePw+Lp Dr10983.1 10 LPPGFRFYPSDEELVCHYLYKKVADHHQSASEGtMVEVDLHTCEPWELP 58 79*********************998776656************9 PP
2	NAM	34.5	5.9e-11	59	87	101	129
NAM 101 glkktLvfykgrapkgektdWvmheyrle 129 g++ktLvfy+grap+g kt+Wvmhe+rle Dr10983.1 59 GMRKTLVFYSGRAPNGIKTSWVMHEFRLE 87 8*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1448 aa Download sequence
MELRDIESTL PPGFRFYPSD EELVCHYLYK KVADHHQSAS EGTMVEVDLH TCEPWELPGM 60 RKTLVFYSGR APNGIKTSWV MHEFRLENPL SLPKEDWVLC RVFKKKKGDE SHASTSADEQ 120 AMQEYNNNNI SEKMSTSLIY IPDEQEEDMY NKESSSNSIL NLAMFQCCHF LDEVDYSTSI 180 GMRMINSRTD HGDDVDDYGL LLDVGLINNS IGITMGTELL GPCLKDDPES IPPGFSPHPA 240 FTLQRIKEND MATDQTSDPL RTSMVSECSS AGDEKLKKSL RHRPSVNYKC FDNSSDEDEP 300 ETAVVKQDGP SKRYLPKGVR RGCSECDTCQ KVLARYRPED ACRPVLDDAP VFYPSEEEFK 360 DTLRYIASIR PKAEQYGICR IVPPPSWRPP CPLKENDIWE HSMFGTRIQQ VDKLQNRSVK 420 QRCQNHSTMK RKRRKLSRMR EDCANRYEKN IEADETDYSS EERFGFVAGP SFTLESFQKY 480 ANDFRRQYFC KEDANMITNP EQTEPSLENI EGEYWRIVER PTEEIEVLYG ADLETGSFGS 540 AFPKASSTPS DSELKDQYVV SGWNLNNLAR LPGSVLSFES GDISGVLVPW LYIGMCFSSF 600 CWHVEDHHLY SLNYLHWGAP KIWYGVPGRD AVKLETAMKK HLPELFEEQP DLLHNLVTQF 660 SPSTLKSEGV PVYRCVQQSG EFVLTFPRAY HSGFNTGFNC AEAVNVAPVD WLPHGQNAVE 720 LYREQKRKIS ISHDKLLLGA AKEAVRAHWN SAFMKKNTSV ESRWKDVCGQ DGILAMALKA 780 RVEMERASRD YLCCSAQSRK MDTAFDANVE RECFLCHYDL HLSAAGCSCS PDKFACLSHA 840 KQLCGCDWNS RFFLFRYEVS ELHTLVDALG GKLSAVHRWG VSNLGLSLTN CINKDKPRES 900 KPVNRTVSQD AKKQVKELIN HGISAGDEKK CSLSKEIKTP MLQPSSSKAP KEVEKMANNS 960 AGSTIMPVDP SSQQLPPKPT IVTPASLETC PPQSSAPLAI ADQRSQSISH RSTAAGSSST 1020 SYNEISRKIS PNPISLPTTT GGQNSISCSS LVSRVKNLSD SSVVLGLHAY TDRLACNISA 1080 ISSSINDGKG AQVTRPDKLN RESSMEKQES VARLIKSDEK VICDSQTDSV LVTPETNAST 1140 MCERDIEMLE KPETNASAIP LNPQQFTGLI RANTETEVGK DGSDRVHNLI DKGQSVIVGA 1200 SCPPNSIDRH NNHSQKGPRM AKVVRRVKCS VEPLEYGVVL SGKLWSTSQT IFPRGYRSRV 1260 RYLSILDPTQ MCHYISEILD AGLLGPLFMV KVEQCPSEVF FHVSASKCWD LVRMRVNLEI 1320 MRQHNLGKTN LPSLQPQGSL DGLEMFGLTS PTIMQVIEAN DHDRVCSEYW KSKQHSAKPP 1380 TPCLKDGQVS KDGPLLVGTN TALLSLFKKA NPEELRVLQT ILSEDNAAAS KASIIQVLDQ 1440 EIKRHNPL

Sequence ? help Back to Top

Protein Sequence Length: 1448 aa Download sequence

MELRDIESTL PPGFRFYPSD EELVCHYLYK KVADHHQSAS EGTMVEVDLH TCEPWELPGM  60
RKTLVFYSGR APNGIKTSWV MHEFRLENPL SLPKEDWVLC RVFKKKKGDE SHASTSADEQ  120
AMQEYNNNNI SEKMSTSLIY IPDEQEEDMY NKESSSNSIL NLAMFQCCHF LDEVDYSTSI  180
GMRMINSRTD HGDDVDDYGL LLDVGLINNS IGITMGTELL GPCLKDDPES IPPGFSPHPA  240
FTLQRIKEND MATDQTSDPL RTSMVSECSS AGDEKLKKSL RHRPSVNYKC FDNSSDEDEP  300
ETAVVKQDGP SKRYLPKGVR RGCSECDTCQ KVLARYRPED ACRPVLDDAP VFYPSEEEFK  360
DTLRYIASIR PKAEQYGICR IVPPPSWRPP CPLKENDIWE HSMFGTRIQQ VDKLQNRSVK  420
QRCQNHSTMK RKRRKLSRMR EDCANRYEKN IEADETDYSS EERFGFVAGP SFTLESFQKY  480
ANDFRRQYFC KEDANMITNP EQTEPSLENI EGEYWRIVER PTEEIEVLYG ADLETGSFGS  540
AFPKASSTPS DSELKDQYVV SGWNLNNLAR LPGSVLSFES GDISGVLVPW LYIGMCFSSF  600
CWHVEDHHLY SLNYLHWGAP KIWYGVPGRD AVKLETAMKK HLPELFEEQP DLLHNLVTQF  660
SPSTLKSEGV PVYRCVQQSG EFVLTFPRAY HSGFNTGFNC AEAVNVAPVD WLPHGQNAVE  720
LYREQKRKIS ISHDKLLLGA AKEAVRAHWN SAFMKKNTSV ESRWKDVCGQ DGILAMALKA  780
RVEMERASRD YLCCSAQSRK MDTAFDANVE RECFLCHYDL HLSAAGCSCS PDKFACLSHA  840
KQLCGCDWNS RFFLFRYEVS ELHTLVDALG GKLSAVHRWG VSNLGLSLTN CINKDKPRES  900
KPVNRTVSQD AKKQVKELIN HGISAGDEKK CSLSKEIKTP MLQPSSSKAP KEVEKMANNS  960
AGSTIMPVDP SSQQLPPKPT IVTPASLETC PPQSSAPLAI ADQRSQSISH RSTAAGSSST  1020
SYNEISRKIS PNPISLPTTT GGQNSISCSS LVSRVKNLSD SSVVLGLHAY TDRLACNISA  1080
ISSSINDGKG AQVTRPDKLN RESSMEKQES VARLIKSDEK VICDSQTDSV LVTPETNAST  1140
MCERDIEMLE KPETNASAIP LNPQQFTGLI RANTETEVGK DGSDRVHNLI DKGQSVIVGA  1200
SCPPNSIDRH NNHSQKGPRM AKVVRRVKCS VEPLEYGVVL SGKLWSTSQT IFPRGYRSRV  1260
RYLSILDPTQ MCHYISEILD AGLLGPLFMV KVEQCPSEVF FHVSASKCWD LVRMRVNLEI  1320
MRQHNLGKTN LPSLQPQGSL DGLEMFGLTS PTIMQVIEAN DHDRVCSEYW KSKQHSAKPP  1380
TPCLKDGQVS KDGPLLVGTN TALLSLFKKA NPEELRVLQT ILSEDNAAAS KASIIQVLDQ  1440
EIKRHNPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	429	436	MKRKRRKL
2	430	435	KRKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	2e-40	C2H2 family protein

Link Out ? help Back to Top
Ensembl	Dr10983.1