PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11025.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 435aa    MW: 48615.9 Da    PI: 6.7335
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11025.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-191767255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +++GVr ++ +g+++AeIrd ++   + +r++lg+f+taeeAa+a+++a+ +++g
  Dr11025.1 17 RFRGVRKRP-WGKYAAEIRDSNK---HgARIWLGTFBTAEEAARAYDKAAXAMRG 67
               69*******.**********533...34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MEEGEGSSVK AKEGEVRFRG VRKRPWGKYA AEIRDSNKHG ARIWLGTFBT AEEAARAYDK  60
AAXAMRGQLA VLNFPDEVSL NFPSFSMPTS PTVHVESESK ESEKQVFEIE YLDNKLLEDL  120
LEFAEKNLDS LAMAMSLDLR RNIHVYIDVG NKGGIHSAYW CKADYNFDDD SDDEXNGNRC  180
LSTALVIVYG QQPEVGDDAS FQSDNEEFDV LHSCSSSNLG VGPSRPRYSX FNAEVDMRNP  240
HFNIGMKFRD FKQFKEDSLP GSEQHMILPL LGNKKRGRKT LLRRREIDED NIGFNKGKGN  300
WANADANSLR QRQSADDAFV DIPVQGNPQG THEPRQEPGN AFVDNQVLTN QQVNSTTEQI  360
IATGTIAASG DMMRRKLEIR RPTTIAPRRQ PMLKPGKNVD NKNKEQGGAG KRRKVWLPTR  420
VGASSGGGGT QGRQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.12e-27ERF family protein