PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11027.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 196aa    MW: 21636.1 Da    PI: 5.1634
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11027.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-1855105255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  Dr11027.1  55 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFAMRG 105
                69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MVSCENSLPF NVNDTEEMLL FEMLASASAS SVSXSTLSGE EVDSGGRKTD HKEKSYRGVR  60
RRPWGKFAAE IRDSTRHGIR VWLGTFDSAE AAALAYDQAA FAMRGTMAVL NFPVEMVQES  120
LEQLKNGGGI DDGECSPVVA LKRRHSMRSK TVGKNKKSKE SVVELEDLGE EYLDELLRTS  180
LEVNCGVNCS TNSVRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-45ERF family protein