PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11066.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 272aa    MW: 30754.1 Da    PI: 7.0622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11066.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-184190255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Dr11066.1 41 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 90
               799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MELHFQQQQH VLKVSKTSKF KGRNKNNNNN NNKHKNKNKN KFVGVRQRPS GRWVAEIKDT  60
TQKIRMWLGT FETAEEAARA YDEAACLLRG SNARTNFITH PSSNSPLASR IRNLLINKKL  120
NNNNNTNDHI SMAMAMTPSP SPPNNDTSSS SSSSLSSSPS ASISVHEDDQ GKQESYDTVQ  180
FGECQDQFDV GCCSSLDLSW LYDPGFEGFE VHKNSVAHQS VEMMSEFDRM KVERQISASL  240
YAMNGVHEYF ETLTDPSSDH MWDLPPLYFY GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-24ERF family protein