PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11132.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NF-YA
Protein Properties Length: 339aa    MW: 36693.8 Da    PI: 10.0809
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11132.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA941.8e-29168221458
  CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                +YVN+KQy++I++RRq+Rak+e  +kl +k rkpy+heSRh hA+rR+RgsgGrF
  Dr11132.1 168 IYVNSKQYHGIMRRRQARAKAEMANKL-IKVRKPYMHESRHLHAMRRARGSGGRF 221
                9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MQSTMSLKKN GGVGQICVLQ QPQAPVMPWW VGSPAVYGES FGQLKPFSVD QSNGVSPVPV  60
TIGQMHHSAD QRLGPEPAIQ EKGSNGITKF TIFPDNKDLA GGQKTQQLSP GITVPPESQG  120
CFELGLGQPM VYSNYPYADQ CYGLFAPYAA QTAGRMLLPV NVADNRLIYV NSKQYHGIMR  180
RRQARAKAEM ANKLIKVRKP YMHESRHLHA MRRARGSGGR FLNTKKVTNV QGGSAGNTKA  240
KVAKVAKPPT PPAGSPSSEV LPSDDSRNLN SATGASSWSG SEVTSIYSRE EVFNRLNIID  300
HLHRPAFHPL SLVMDGEHNA GISAKWATAT NGCCDLLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.23e-45NF-YA family protein