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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr11254.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | bHLH | ||||||||
| Protein Properties | Length: 257aa MW: 29120.1 Da PI: 7.5946 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 26.6 | 1.1e-08 | 120 | 167 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq
Dr11254.1 120 SHSLAERVRREKISERMKLLQGLVPGC----DKVIGKALMLDEIINYVQSLQ 167
8*************************9....555*****************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 257 aa Download sequence |
MATFSYNPIN ILNGEITSNN TTSSFLDLIN GTTNDTNCIS FDSTTTTTIN ASMENKIIKD 60 KKKKKKKRKH IDDTTSCFNS LPEDIKEANY KEGDHQKKAK ANDQEGFVHV RARRGQATDS 120 HSLAERVRRE KISERMKLLQ GLVPGCDKVI GKALMLDEII NYVQSLQHQV EFLSMKLIAT 180 MNPMNNFNMD PYASYMITHH EELLVHQPNH TQPTAFQDTT NSYRMIQCPT AFLDLQDNGG 240 YMMQMGGVLV NNMCSLN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 61 | 67 | KKKKKKK |
| 2 | 61 | 69 | KKKKKKKRK |
| 3 | 61 | 100 | KKKKKKKRKHIDDTTSCFNSLPEDIKEANYKEGDHQKKAK |
| 4 | 62 | 68 | KKKKKKK |
| 5 | 62 | 101 | KKKKKKKRKHIDDTTSCFNSLPEDIKEANYKEGDHQKKAK |
| 6 | 63 | 69 | KKKKKKK |
| 7 | 63 | 102 | KKKKKKKRKHIDDTTSCFNSLPEDIKEANYKEGDHQKKAK |
| 8 | 64 | 103 | KKKKKKKRKHIDDTTSCFNSLPEDIKEANYKEGDHQKKAK |
| 9 | 64 | 69 | KKKKRK |
| 10 | 65 | 104 | KKKKKKKRKHIDDTTSCFNSLPEDIKEANYKEGDHQKKAK |
| 11 | 66 | 105 | KKKKKKKRKHIDDTTSCFNSLPEDIKEANYKEGDHQKKAK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G07340.1 | 2e-44 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr11254.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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