PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11259.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 251aa MW: 28616.2 Da PI: 9.8862

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11259.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.5	1.1e-35	18	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lppGfrF+Ptdeelvv+yL +kv + +l+ ++i+e+d+++++P++L+ + ++eke yfF ++++++ +g+ +++ +sgyWka gk+ ++ls+ +++l Dr11259.1 18 LPPGFRFRPTDEELVVQYLWRKVLSFPLPS-SIIPEIDLNDYDPKNLHDWI-EREKEGYFFKCKRSTNGSGSSEEKR-SSGYWKAIGKEMPILSSrSNKL 114 79************************99.89**********8555.5689999999999988877774.68**********9866778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk+L+f++gr kt+W+mhe+rl Dr11259.1 115 VGMKKVLIFFRGRC----KTKWIMHEFRL 139 ******6654....89*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MESLEYSKKI NGGVWKKLPP GFRFRPTDEE LVVQYLWRKV LSFPLPSSII PEIDLNDYDP 60 KNLHDWIERE KEGYFFKCKR STNGSGSSEE KRSSGYWKAI GKEMPILSSR SNKLVGMKKV 120 LIFFRGRCKT KWIMHEFRLA GVAAGIKSRM FSQXESFTCQ EKEWMVCRIF KKRKDKKIHA 180 RVTDHSIDSK NQVNKVSRNS TSSSSSSSSS SPSSSSSSNL SCVIDVMEDS GSEDEFSSKS 240 MDSSSYGNLQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	8e-36	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr11259.1