PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11303.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 350aa    MW: 40448.5 Da    PI: 10.0327
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11303.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.23.4e-07109149350
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                 +GV+ +  + ++ A I++      +++++lg+  t  eAa+++++a+
  Dr11303.1 109 MRGVYLK--NTKYQAAIKVD-----KRQIHLGTVKTQAEAARLYDRAA 149
                69**865..56********4.....5********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MVSLRRRRLL GLCPGIDSHM VEILSSFEND NLVENSNQNC KQSTVHPLPT DVVDQPELIQ  60
ISEELPESAS LSGSTSMKEE PEHDFPDKQF KYRKHYRRKR YKDQEQPTMR GVYLKNTKYQ  120
AAIKVDKRQI HLGTVKTQAE AARLYDRAAY ICGRQPNLEL SKEEKQELSK YKWDEFLEMT  180
KRSIASKSHL HLWKASHHQG EQLAFTIVTP TPFTKVQIHI YKKPKYSNMR LQPLQDHNTN  240
KYKERGPTAI LDSTLTSSIL AQHVTVALDT VAVTACYCVV LERRRTSMAS LLRWGGRPVD  300
YYKGQFRWKC RILTGYSSVN RCHHTVNRWV NVKGMSTLMA LNLAVATIKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.26e-27ERF family protein