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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr11391.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | NAC | ||||||||
| Protein Properties | Length: 963aa MW: 110466 Da PI: 7.3067 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 161.1 | 4.3e-50 | 43 | 170 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99
pGfrFhPtdeelv +yL++kv++k++++ e+ik++diyk++PwdLpk + +ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s g+
Dr11391.1 43 LPGFRFHPTDEELVGFYLRRKVDNKPISI-EIIKQIDIYKYDPWDLPKVSNVGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSPndIGKC 141
69***************************.99***************8888899***************************************9655677 PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
+glkk+Lv+y+g+a kg+ktdW+mhe+rl
Dr11391.1 142 IGLKKSLVYYRGSAGKGTKTDWMMHEFRL 170
***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 963 aa Download sequence |
MELLVMEKKK KIEEEKKVEK EEQEDVEDVE AEKEKEEEED VVLPGFRFHP TDEELVGFYL 60 RRKVDNKPIS IEIIKQIDIY KYDPWDLPKV SNVGEKEWYF FCLRGRKYRN SIRPNRVTGS 120 GFWKATGIDR PIYSPNDIGK CIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPATKNDANN 180 PPSLQEAEIW TICRIFKRNT TYKRYHPQDW SKESPRKRIL ASDASSKTNS FESDTGEDQF 240 KCFGISYVDH QGHDNKIPTT NYFDQRNHFY TTQWNQVATQ TPLTTLHSST LNPNELIKET 300 NWDELGRMTE FMTDPAFVYD GRYSSVTYNS IDGIFSQNRK GGFLIFGKGV KLSSGVEMLF 360 SPRCFDNTKG KIEDSMSTVQ RSLELLGQRG QLYREDPREN HTAEEAQGPV TTPASPLVAT 420 VRVIRICMVP VETFFILVLV LLLAPRTEFS LFVRRQACSS LRTLGFPENQ MATTLVNVRC 480 YLAPIVEMIE GLKKVMNKMH WQILRQTPFA HMMDLVIVLQ ENGEVDALLR IYDGQTERFK 540 IGYIMLQFKP EDVAIIMGVP CMEEIVSFRY EEEGVLSEFE LAYLNKMHNR HHDAIKDNLF 600 RLVRGKSGTE ETFVKLLFMF FTTTVFFPNT FLNSPTFVAR YADNLETIGN YAWAHAIHKW 660 LMDDFPKTVA RVQLRCQGKY YSVGYLKGYS VALIIWFYEV TGNVKNQRVG RTPRILCYWV 720 STFIKASSVD LLLKSLEWKE FYALVPANDK KIILVGHGIG KAKETYVRSS QLANSKKRLE 780 TDRPDKAANG PRGDDDVRGL LHRLLAKFDV LCARMDERDA KDARWDGPDE RTSPVEDVVN 840 WHEDFIRHPS SCTHSQSSMP FKRVARKTIG QHNADKPTNE LTLVVAIEAE LPDPAVPTEG 900 PAEVQGQEPA VTLEGEQAIE GDLSPAAREE KATTPEVSDG SPTQRPLENP TKKVPIKRVP 960 LKR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 8 | 35 | KKKKIEEEKKVEKEEQEDVEDVEAEKEK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G43000.1 | 1e-86 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr11391.1 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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