PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11498.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 262aa    MW: 29578.3 Da    PI: 8.7615
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11498.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.72.8e-3368123359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                   v+Y+eClkNhAas+Gg+a+DGCgEfmps geegt++alkC+AC+CHRnFHR+e e 
    Dr11498.1  68 VVKYRECLKNHAASIGGNATDGCGEFMPS-GEEGTIEALKCSACNCHRNFHRKEIEG 123
                  589*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDLSGHEGDI PIPIPISSTY GGGGGVQNLQ DNNNNNSNNN NNGPLPLTIE EQQQHHHHHH  60
HQNKKGVVVK YRECLKNHAA SIGGNATDGC GEFMPSGEEG TIEALKCSAC NCHRNFHRKE  120
IEGELPPSSS CECYHHYRSM KVVNHHPHHQ QHHKGVLIPR PSPHQMIMPL GAVVQTSESD  180
DMEGVLARPP IVKKRFRTKF TPEQKEKMLS FAXKVGWRLQ KQEESVVQQF CQEIGVKRRV  240
LKVWMHNNKH NLAKKLAPLQ LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.14e-75ZF-HD family protein