PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11499.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

DBB

Protein Properties

Length: 203aa MW: 22004.2 Da PI: 6.7375

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11499.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.7	4.3e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e++ C ++ lC C ++ H H++vpl Dr11499.1 4 QCDVCERAEATVLCCADEAALCWGCDEKVHAAnklagkHQRVPL 47 7*****************************66899999999986 PP
2	zf-B_box	31.9	2.8e-10	61	103	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +++C+ ++ek +fC +++ llC+ C +++H+ H+ Dr11499.1 61 PNPTCDICQEKTGYFFCLEDRALLCRHCDVSIHSAspfvssHQ 103 689******************************6566666676 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MKIQCDVCER AEATVLCCAD EAALCWGCDE KVHAANKLAG KHQRVPLLSC SSSNPSSNSS 60 PNPTCDICQE KTGYFFCLED RALLCRHCDV SIHSASPFVS SHQRFLITGV RVALQHYLTN 120 NSSNISSSSN NVSSNSSSXN GNNIRSNSLA SNSSPANKKL KMSLMNLAGD EVDGRRSQWP 180 WSEILETTGM DQCYGFPEPG ASN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-53	DBB family protein

Link Out ? help Back to Top
Ensembl	Dr11499.1