PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11523.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 307aa    MW: 35202.2 Da    PI: 7.3719
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11523.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1713.8e-53111401129
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                +ppGfrFhPtdeel+ +yLkkk++ +k++l evi++vd++k+ePwdL++  ++ +  ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + + 
  Dr11523.1  11 VPPGFRFHPTDEELLLYYLKKKIAYEKFDL-EVIRDVDLNKMEPWDLQErcRIGStPQNEWYFFSHKDRKYPTGSRTNRATTAGFWKATGRDKCIRT-TY 108
                69****************************.99**************963433332556*************************************9.89 PP

        NAM  98 elvglkktLvfykgrapkgektdWvmheyrle 129
                +++g++ktLvfy+grap+g+ktdW+mheyrle
  Dr11523.1 109 KKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 140
                99****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MASSSSSGSG VPPGFRFHPT DEELLLYYLK KKIAYEKFDL EVIRDVDLNK MEPWDLQERC  60
RIGSTPQNEW YFFSHKDRKY PTGSRTNRAT TAGFWKATGR DKCIRTTYKK IGMRKTLVFY  120
RGRAPHGQKT DWIMHEYRLE DSDDPQNIIS SEDGWVVCRV FKKKCFFKIG SQGIESHTQE  180
SHMNTKGSHE LSRGLTLGEA EYQNLHPNHY PTNLYKSETA LHYWQMPTNT YSFHGQAQDL  240
LQNHRPPSGA YDFSGLPNVD ACDGIQQVEG ERDQTANEWA VLDGVDGRFG SSSGTAVQQM  300
DLWGYGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.11e-87NAC family protein