PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11604.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 212aa    MW: 24296.4 Da    PI: 5.2292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11604.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.41.6e-051592001354
                HHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
        HLH  13 RdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 
                R+ri +  e Lr+++P +  + ++K  + +++L +A++Y++sL
  Dr11604.1 159 RKRIQDTVEVLRRIIPGL-TGVNGKaKDASTVLDEAIRYLNSL 200
                99***************7.48888889999**********999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MLWLSLSVDV FRKVVPLNLY CRVILLSTSV TCSSQLRRKE IFDPKQWNSI VFKVFDQSAA  60
VVSHEEQVVE SEEMHENTEE IDALLYSESN ESHEQHEQDE CEASTGHSPL DLDGTHGYKF  120
KTKRRRLDTE LMDTASSRAR EDESSCIGEE QECNKKSKRK RIQDTVEVLR RIIPGLTGVN  180
GKAKDASTVL DEAIRYLNSL KLRMKGLEFI TD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123127KRRRL
2123158KRRRLDTELMDTASSRAREDESSCIGEEQECNKKSK
3158184KRKRIQDTVEVLRRIIPGLTGVNGKAK