PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11695.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 366aa MW: 41042.7 Da PI: 6.6085

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11695.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.4	2.1e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +++ + Dr11695.1 11 VPPGFRFHPTEEELLNYYLTKKVACEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIHT-SY 108 69**************************.9***********964443122456********************************99.88 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfykgrap+g+k+dW+mheyrl Dr11695.1 109 KRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MSISVNGQSR VPPGFRFHPT EEELLNYYLT KKVACEKIDL DVIRDVDLNK LEPWDIQEKC 60 RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIHTSYKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DHCSDNNSSN VSSCTMGGET GGQEDGWVVC KVFKKKNHHK 180 VLDSPNTSSS ININEAKTQV LHSSNDGXLD QILQYMGRSC KQENEVFNIN TPTTNINSNS 240 NNNAWKYLLP IDAAXGSSLH ERFMKLPALE SPMSNEYPXA HPDNSSGSQT SYTPDGLHAV 300 VNMCSTDMST EAGLGDWAAL DRLVASHLNG SESEASKHDL SCFDDTGYDY QSGGDGDLWS 360 FRHASH

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MSISVNGQSR VPPGFRFHPT EEELLNYYLT KKVACEKIDL DVIRDVDLNK LEPWDIQEKC  60
RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIHTSYKR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DHCSDNNSSN VSSCTMGGET GGQEDGWVVC KVFKKKNHHK  180
VLDSPNTSSS ININEAKTQV LHSSNDGXLD QILQYMGRSC KQENEVFNIN TPTTNINSNS  240
NNNAWKYLLP IDAAXGSSLH ERFMKLPALE SPMSNEYPXA HPDNSSGSQT SYTPDGLHAV  300
VNMCSTDMST EAGLGDWAAL DRLVASHLNG SESEASKHDL SCFDDTGYDY QSGGDGDLWS  360
FRHASH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-109	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr11695.1