PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11746.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family B3
Protein Properties Length: 220aa    MW: 25345.6 Da    PI: 10.4388
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11746.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B387.79.7e-2855143185
                EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                f kv tpsdv+k++rlv+pkk a ++     +k+ ++  l++ed++ ++W+++++y+k+s++yv+tkGW++Fvk+++Lk+gD+v F + 
  Dr11746.1  55 FSKVVTPSDVGKLNRLVIPKKDALKFfpldPSKEVQGLILSFEDRTCKKWQFRYSYWKSSQSYVITKGWSRFVKEKKLKAGDTVSFGHR 143
                889**************************977788999************************************************964 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
METGKEMKMI MNRRANVNQN MDLDHKKAAA EKEEEEEETT AKEKQGNDHS ITLMFSKVVT  60
PSDVGKLNRL VIPKKDALKF FPLDPSKEVQ GLILSFEDRT CKKWQFRYSY WKSSQSYVIT  120
KGWSRFVKEK KLKAGDTVSF GHRIGLTGDK LLFIDWKRHG TQTKDGMRVT LGLKPLNSPL  180
MIPFMQYSLL PPLIMMPFMQ SRANAPKQVR LFGVNLVSKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-47B3 family protein