PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr11759.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB

Protein Properties

Length: 229aa MW: 26372 Da PI: 6.3654

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr11759.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g+ R++k+c++rw +yl Dr11759.1 14 KGPWTAEEDKKLINFILNNGQCCWRAVPKLAGLSRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	56.2	8e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ Dr11759.1 67 RGLFTDSEEQLVIDLHARLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 111 7889****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL NNGQCCWRAV PKLAGLSRCG KSCRLRWTNY 60 LRPDLKRGLF TDSEEQLVID LHARLGNRWS KIAAKLPGRT DNEIKNHWNT HIKKKLMKMG 120 IDPVTHEPLH EKKDGKEERV EVKLEEEKEK KRLENSSMND ENLMESFLWG SNDNYNSNNV 180 DVIGESMWSF PNNELEDFNS VIGMSPLEET CEWLFDYQGF GVLGDGLGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	3e-84	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr11759.1