PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11828.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 193aa    MW: 22107.5 Da    PI: 4.4812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11828.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-1977127255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp+ +g   r++lg++++a eAa+a+++a+ +++g
  Dr11828.1  77 RYRGVRQRP-WGKYAAEIRDPKRRG--CRVWLGTYDSAVEAARAYDKAAFEMRG 127
                7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MDSSLFFSLS TSPLPSPSQA LQASSMITSM ETQDISVSDY FSDNTEVEYI KSNTICNLIS  60
FSCEEEEEEE EKEKERRYRG VRQRPWGKYA AEIRDPKRRG CRVWLGTYDS AVEAARAYDK  120
AAFEMRGRKA ILNFPNEFGC SSEWVEVSPE PEKKRRKVEM EVVVKKEEVG XEWDSVWESL  180
GPLSPLSEIM AAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153157KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61600.15e-34ERF family protein