PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr11941.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 308aa    MW: 34642.4 Da    PI: 6.4245
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr11941.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.79.7e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +l+ +   +G+g+W++++++ g++R++k+c++rw +yl
        Dr11941.1 14 RGLWTAEEDAKLLAYTSTHGTGNWTSVPKKAGLKRCGKSCRLRWTNYL 61
                     788*******************************************97 PP
2Myb_DNA-binding43.38.5e-1469110346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++T++E+e ++ +++  G++ W+ Ia+ ++ gRt++++k++w++
        Dr11941.1  69 SFTPQEEEMIITLHATIGSR-WSIIANQLP-GRTDNDVKNYWNT 110
                      79******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRPPCCDKS TVKRGLWTAE EDAKLLAYTS THGTGNWTSV PKKAGLKRCG KSCRLRWTNY  60
LRPNLKHESF TPQEEEMIIT LHATIGSRWS IIANQLPGRT DNDVKNYWNT KLSKKLVQRG  120
IDPVTHKPIS QLLQSIGGLP GASITTTTPT GARYNPSHEV KVSSLNRDLK NYFLSKPSSS  180
SSELKPNWEL PPLNYHHHHV STIADSTLSF SVTETSSSSV TTTDLSWSDY LSKDVFMQNE  240
KEEVQGTGSS RENQKSDMKE EEEMMISGEX LGECSDASIX FIDALLDLDR EMRMEFPEFL  300
VDDSFSFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.18e-76MYB family protein