PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr12185.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 266aa MW: 29544.2 Da PI: 8.4073

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr12185.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.6e-40	20	80	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvPvGgg+rk kk++ Dr12185.1 20 PEQPLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPVGGGCRKAKKTK 80 68899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MASDDSQTSG DRQNTQLRPP EQPLKCPRCD SPNTKFCYYN NYSLTQPRHF CKTCRRYWTK 60 GGALRNVPVG GGCRKAKKTK SSCSSTTSSS SSIVSSSTSQ FFNCFPPPSV VSSADYSVLS 120 FSRLNQSSPV FNSXTDHQMG FSGSIASSIE SLSSINQDLH WKLQQQRLAM LFGTAEAHKE 180 QPSLGPAVMM IDPQPVEPLP TFHHQVPGTS KSWFLDNSFL INNNNNNNVN NSNNNNNNNN 240 NDNTGSNWNG MASWNDMHHH EFNSMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28810.2	1e-33	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr12185.1