PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr12364.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 140aa    MW: 15523.3 Da    PI: 7.7702
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr12364.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY42.41.4e-1322612258
               EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
       WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
               rsYYrCt +   gC ++k v+r +edp+++ei+Y g H++
  Dr12364.1 22 RSYYRCTNPdrkGCLARKLVQRLQEDPTTFEIVYYGIHTC 61
               9******998899*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MSATLHTIHC NDPYPLPIMR LRSYYRCTNP DRKGCLARKL VQRLQEDPTT FEIVYYGIHT  60
CGSSVTMPCS TSPTNLEHNQ QSQSQSFSIQ LGTCSSGEVQ CSATNANAHS KDMTGKEAIR  120
SDRSDSSDSS VNIRATKEKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.29e-12WRKY family protein