PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr12626.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 163aa    MW: 18426.2 Da    PI: 5.2898
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr12626.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.1e-074262548
                     HHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 25 ktIartmgkgRtlkqcksrwqkyl 48
                     ++Ia +++ gRt++++k++w+++l
        Dr12626.1  4 SLIAGRLP-GRTANDIKNHWNTHL 26
                     58******.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MGXSLIAGRL PGRTANDIKN HWNTHLSKKI NSKDKSWNRK TIAKGITSIK XREKQGEFKI  60
IKPQPWTIPV NWSWLKDQPV HRGQLQDKSG INIADPLNNN VSREESATII PEKLDDVFLG  120
IDDMTVGEMG NNFEIGNIGG NGDEQFFEQE DAGWTDFLLD MDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-13MYB family protein