PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr12708.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 225aa    MW: 25315.7 Da    PI: 7.8245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr12708.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-0870109445
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLe 45 
                ++  rE+ RR r+N++f+eL ++l +     p  K +K++iL 
  Dr12708.1  70 TKACREKMRRIRLNDRFAELCSILDPkK---PPAKADKVAILX 109
                6789********************8856...99********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGSYHNLDGG WLAEYGLEDE DTLVDFIWPD ATVASAILEF DVSQKMDSLL ENNCTKKRTR  60
VESCCAAPAT KACREKMRRI RLNDRFAELC SILDPKKPPA KADKVAILXD XNHLLNQLRL  120
EAQKLKESNE ALQVSLKNLK AEKVELRDEK VRLKAEKERM EKILRSISIA PHSLHPVASV  180
QAAAFTACTK ALPYPTYNTP MGMWQWIHPA ALDTSQDPVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.13e-45bHLH family protein