PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13145.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 290aa    MW: 32222.5 Da    PI: 7.0424
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13145.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer92.43.9e-2985137258
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  ++v+YkeCl+NhAas+Ggh+vDGCgEfmp +g+    +a+kC ACgCHR+FHR+++ 
    Dr13145.1  85 TNVQYKECLRNHAASIGGHVVDGCGEFMPGSGD----DAMKCDACGCHRSFHRKDSY 137
                  589**************************9444....6****************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEFRGGGGQD EGMGGYNPST PIKNSAFSKP TLSPSSTLLI SPRGFPHPGG ARNGNCAFEI  60
PSSSSSPLNP LHSRALDSTE PPPATNVQYK ECLRNHAASI GGHVVDGCGE FMPGSGDDAM  120
KCDACGCHRS FHRKDSYADN RVPLLLPLPP PSSATESSSE ELNAVAAHHR PAAVASASAP  180
RKRFRTKFTA EQKERMLGFA ESVGWRIQRQ DEATVEQFCT EVGVKRQVLK VWMHNNKHSI  240
RKHIHQLPQQ QQQQQHHHHQ QEHEQEQEQA QDQDQDQQQT HHQQQQMQEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-47ZF-HD family protein