PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr13192.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 292aa MW: 32893.8 Da PI: 8.812

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr13192.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.3	3.7e-33	57	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWkat 86 lp+G++F+Ptd+el+ e+L+ k++ ++ ++++ +i+ +i++++P++Lp v+ + +fF++ +k+y+tg+rk+r+++ + +W++t Dr13192.1 57 LPAGVKFDPTDQELL-EHLEGKARLDSqklhplIDEFIpTIEGEnGICYTHPEKLP-GVSRDGLIRHFFHRPSKAYTTGTRKRRKVHtdeqggETRWHKT 154 799***********.99999887774565443332333665557********.555555677**************744456555778 PP NAM 87 gkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 gk+++v+ +g+l+g kk+Lv+y g+++k+ekt+Wvmh+y+l Dr13192.1 155 GKTRPVFI-GGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 197 ****.9*********6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MTWCDGCNDD SKSPTTSSTS LVGKRSLETT XRTCPSCGHR IHCTKEQATP IQDLPGLPAG 60 VKFDPTDQEL LEHLEGKARL DSQKLHPLID EFIPTIEGEN GICYTHPEKL PGVSRDGLIR 120 HFFHRPSKAY TTGTRKRRKV HTDEQGGETR WHKTGKTRPV FIGGKLKGYK KILVLYTNYG 180 KQRKPEKTNW VMHQYHLGSD EEEKDGELVV SKVFYQTQPR QCGSMAKDSS NPLKLKGLND 240 QNENTILKDG NVVDYYHQSL MTYNQGVHNR SGNSPHLLAN FSMHADGSPF LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28470.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr13192.1