PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13269.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 250aa    MW: 27895.8 Da    PI: 8.0995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13269.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-16119164150
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 
                ++ykGVr++k +g+Wv+eIr+p   g + +r +lg++ t+e Aa a++ a 
  Dr13269.1 119 KKYKGVRRRK-WGKWVSEIRVP---G-StQRLWLGSYSTPEAAAMAHDTAV 164
                59*****998.**********8...4.35******************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MIMRRTTRCN ATPWHCLSEI KQKALQKVEH DVIWRFPFSP FSGPKMGFHN MDPFEVNGGE  60
EFSLLPAPQG DVSGNPRPVG AGPRGERGFP APPPFLGFTT DKKERRNSGE XENIAGEEKK  120
YKGVRRRKWG KWVSEIRVPG STQRLWLGSY STPEAAAMAH DTAVVLLRPS SSSFNTLNFP  180
NEAPSFXLEP GNVSPDTVQR LASNRGMAMD ARLTVKLPEK EEXRHAENLV MLHESEFGGG  240
DISVDDYICN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122128KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.16e-33ERF family protein