PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13280.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ZF-HD
Protein Properties Length: 271aa    MW: 30936.4 Da    PI: 7.8504
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.81.1e-3268121458
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  v+YkeClkNhAas+Gg+a+DGCgEfmps geegt++++kC+AC+CHRnFHR+e++
    Dr13280.1  68 VKYKECLKNHAASIGGNATDGCGEFMPS-GEEGTIESFKCSACNCHRNFHRKETD 121
                  89*************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDLSGHEGVE MAIPISSTYT VQQRQQQQQQ QALSQGLING PHPPSEEQHQ HNQKKLSSSS  60
TSPSPSWVKY KECLKNHAAS IGGNATDGCG EFMPSGEEGT IESFKCSACN CHRNFHRKET  120
DVAETYSLVP RSAGGAQMVM PLGSFHTSES DEMDRQQHHH HHHHHHHQQQ QGPVVRKRFR  180
TKFTQEQKEK MLDFAESVGW RLQKQEESVV QHFCQEIGIK RRVLKVWMHN NKHNLAKKDL  240
NDSNVVVHPH PHPHPHPPPP THHHHTSLQL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.12e-68ZF-HD family protein