PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr13408.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 181aa MW: 20302.3 Da PI: 10.6345

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr13408.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	29.6	1.4e-09	129	147	3	21
-SS-EEEEEEE--TT-SS- CS WRKY 3 DgynWrKYGqKevkgsefp 21 D+++WrKYGqK++kgs++p Dr13408.1 129 DEFTWRKYGQKPIKGSPYP 147 99****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MLSNNAKEME ADNFAAVAEE LMKKVRQGLS FIDGRRVGHA RFRKGPVLVN QSSSETMVLN 60 CQPLQCLPPM APGEGRCTEW RSSLSXESPA MKRRLEECCH CGKKRKXKMR RMVRVPLMAI 120 NKGSTEQLDE FTWRKYGQKP IKGSPYPSEV SGSRGLRRPL PPFPAQAALL LPMTGIPPQL 180 L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	106	KRRLEECCHCGKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23320.2	8e-09	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr13408.1