 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Dr13435.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 268aa MW: 30429.7 Da PI: 4.583 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 64.2 | 1.9e-20 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe ++++ e+++eLA++lgL+ rqV vWFqNrRa++k
Dr13435.1 65 KKRRLTPEQVRLLERSFEAENKLEPERKTELARQLGLQPRQVAVWFQNRRARWK 118
5678*************************************************9 PP
| |||||||
| 2 | HD-ZIP_I/II | 133.8 | 6.2e-43 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl+ eqv+lLE+sFe+e+kLeperK+elar+LglqprqvavWFqnrRAR+ktkqlE+d+++Lk++yd+l +++++L++++e+Lr+++++
Dr13435.1 64 EKKRRLTPEQVRLLERSFEAENKLEPERKTELARQLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASYDSLLADRDALRQDNERLRSQVAT 156
69**************************************************************************************99975 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 268 aa Download sequence |
MMDSGGRLIF DSSTDSHGRM LILGGGSQIF HAGVDDGVGK RQRPFFTLPD ELLEEEYYDE 60 QLPEKKRRLT PEQVRLLERS FEAENKLEPE RKTELARQLG LQPRQVAVWF QNRRARWKTK 120 QLERDFDRLK ASYDSLLADR DALRQDNERL RSQVATLSEK LQGKEVAPGI VDVKQDVHAA 180 EIIEEKVPVK AEDRLSIGSG GSAVVDGERN QLVDSSGESY FHDEYQGGCC IVGEEDDGSD 240 DGCSYAVFAN QHHPEPDPDQ LGWCFFWN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 113 | 121 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G01470.1 | 2e-63 | HD-ZIP family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | Dr13435.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|