PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr13907.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 219aa    MW: 25757.6 Da    PI: 10.1636
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr13907.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.9e-11115155350
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                 +GV+++ +  +W A I++      +k+++lg+ g+ eeAak++++a+
  Dr13907.1 115 MRGVYFKNT--KWQAAIKVD-----KKQIHLGTVGSQEEAAKLYDRAA 155
                79***9765..********4.....5********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MVSLRRRRLL GLCSGKHSFS IGIPKFFENN TFVESRNQNI RPSSVHPLPA VIIDHQKLVK  60
LNCIIPFSCV LISEECVEST TVIKEEVDHY FQDKKIKHRK NYRRKQYKDQ EPPIMRGVYF  120
KNTKWQAAIK VDKKQIHLGT VGSQEEAAKL YDRAAYICGR RPNFELSEEE KQELSRYKWE  180
EFLEITRNSI SSKKHQRRQG GGRKKMNENN LQCNNLESM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.25e-40ERF family protein