PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14070.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

SBP

Protein Properties

Length: 147aa MW: 16675.6 Da PI: 8.1493

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.1	2.2e-42	55	131	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C+adlseak+yhrrhkvCe hsk+pvv+vsgl+qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk+qa Dr14070.1 55 CQAERCKADLSEAKRYHRRHKVCESHSKSPVVIVSGLRQRFCQQCSRFHELAEFDDTKRSCRRRLAGHNERRRKAQA 131 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
MESIKDKTPH KDDDEEEEDD EEEVVVMAAM TGAGADQDQE KKKRKGGAAV SQPSCQAERC 60 KADLSEAKRY HRRHKVCESH SKSPVVIVSG LRQRFCQQCS RFHELAEFDD TKRSCRRRLA 120 GHNERRRKAQ AHPPVAGKQN TLVEGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	3e-40	SBP family protein

Link Out ? help Back to Top
Ensembl	Dr14070.1