PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14076.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 209aa    MW: 22961.9 Da    PI: 8.7994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14076.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-202170255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a+++++g
  Dr14076.1 21 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDTAAREFRG 70
               69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MATTTMEKKE IEEKPKEKEM HYRGVRKRPW GRYAAEIRDP GKKSRVWLGT FDTAEEAARA  60
YDTAAREFRG SKAKTNFPYP ESYQTPVAGV VEGRSPSSQS STVESSSREA APVPISPPLD  120
LHRGISRFPF QPYSAAPQPF FLFNSIVTPE KSALAIVGRP VFLSDLHAGG GVQSDSDSSS  180
IVDLHPSPPP AKRLPFDLDL NLPPPPEIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-24ERF family protein