PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14160.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB

Protein Properties

Length: 247aa MW: 28065.3 Da PI: 5.6903

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14160.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WTteEd +l ++v++ G g W+t +++ g+ R++k+c++rw +yl Dr14160.1 31 RGPWTTEEDAILSNYVQREGEGKWRTLPQRAGLLRCGKSCRLRWMNYL 78 89****************************99**********97 PP
2	Myb_DNA-binding	47	5.7e-15	88	129	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Dr14160.1 88 AADEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 129 579*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MRNPSSYSSS SSSTLKRKGP TPCCTKDSVK RGPWTTEEDA ILSNYVQREG EGKWRTLPQR 60 AGLLRCGKSC RLRWMNYLRP SVKRGAIAAD EEDLILRLHR LLGNRWSLIA GRIPGRTDNE 120 IKNYWNTHLS KKLIGQGIDP RTHKPFENGV QEHAIHVVAE GNPNPNPNYP NPNNVSGDQQ 180 FNYEGFENYL EGIEVDCGEI WKSTGEGLFI DQMECNEGKS VEENDEIFGF LNSLMNDDVD 240 ELHEIKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	8e-79	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr14160.1