PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14163.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 350aa    MW: 39526.4 Da    PI: 10.2358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14163.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31.1e-142164148
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
               +gy GVr ++ +gr++AeIr ps+   +kr++lg f+t+eeAa a++ 
  Dr14163.1 21 TGYLGVRKRP-SGRYAAEIRNPST---KKRHWLGXFDTPEEAAVAYDM 64
               699*******.7*********965...5******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MLDLQCIILP RHQRRRCRAS TGYLGVRKRP SGRYAAEIRN PSTKKRHWLG XFDTPEEAAV  60
AYDMSSITFR GIEKAQTNFW YKFLTMSSPS PPSPPPSPLS SEKEKKYCSE DNLEINDDHD  120
HLVXRDDDWI NITTILQSFC QSNALPSSLI LATGRTLIET FPIQELDAEP NSSPRTSKRA  180
SLLFAGSRHQ SMLPISYRVS PSCQQRQIIT VHPPGMSRPF RVRSEXGLRE WNNHSRLLLA  240
LSLPRQGRDA RKPYNKPPPP GESDVLVGGK LSGRGNLQLA RLGNFPVCLL PVACHVKRGY  300
WPLPIHQLWD PEDRVTTRVQ RPCSGILMFP TFGLTSSRAS SSLGYITNRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-20ERF family protein