PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14164.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 184aa    MW: 21005.7 Da    PI: 7.0283
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14164.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.3e-115396148
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
               +gy GVr ++ +g ++AeIr  s+   +kr++lg+f+t+ee   a++ 
  Dr14164.1 53 TGYLGVRKRP-SGHYAAEIRNHST---KKRYWLGTFDTPEETTVAYDM 96
               699*******.7*********643...5*************9888885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MGEDGIDWKS LWLVQAWTQG SRRLQQIAMA GDILDLQCII LPRHQKRRCR ASTGYLGVRK  60
RPSGHYAAEI RNHSTKKRYW LGTFDTPEET TVAYDMSSIT FRGIKKAQTN FCYNFLTVPS  120
PPPPLPPPSP LPSEKEKENC YEDNFEINDN HDHLVDRDGD DWINITTILQ SFGQSNALPS  180
SLIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-20ERF family protein