PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14171.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

SBP

Protein Properties

Length: 1567aa MW: 172874 Da PI: 6.6632

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14171.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	71.2	1.9e-22	616	669	1	54
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelse 54 +Cqv++C++ l+eak+yhrrhkvCe hsk++++lv++++qrfCqqCsr+ +l+ Dr14171.1 616 MCQVDDCKVLLTEAKDYHRRHKVCELHSKTAKALVANQMQRFCQQCSRYPSLES 669 6************************************************99876 PP
2	SBP	48.5	2.3e-15	689	720	47	78
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 +rfh lsefDe+krsCrrrLa+hn+rrrk+q+ Dr14171.1 689 GRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 720 79***************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1567 aa Download sequence
MAPLLTQSVS SHPSLSRHCS CHALRHKASR PVFKASWQEL TGVLVFSAIP FTAVKAIANS 60 SLGEKLRKRL EETKREAVDG SSRFRAQAQR AREDSFWYGA ERPRWLGPIP FEYPSYLTGE 120 YPGDYGFDIA GLGRDSASFQ KYFNFEILHA RWAMLAALGV VIPELLDMQG LVHFVEPVWW 180 KVGYAKLQVP YFFLXQGDTL DYLGIPGFHI AGSQGIIVIA ICQVLLMVGP EYARYCGIEA 240 LEPLGIYLPG DINYPGGFLF DPLGLSKDPV SFEDLKVKEI KNGRLAMVAW LGFYLQAALT 300 GKVLAGMYIR HTGIQLNVSL CHAGFSSLST TCGCGRSPFL PSIPPPLSNS GIVLRYRPCH 360 VSFIETNDVA IVVDLVLLQL QLQLQLGSGV VASVLLDSWF LLSLSWTIEI SRIVSESGNG 420 IKATISVVLV LAAWRGFSYL SHSCHFDPAD CATPLLDRPP SYSFYITNES AGSLLDCSRP 480 RSMEAEVGSS AMFLHHHHHH DVPAAAKKRD FSWSSSSSSP SPAFLYNQHL SGDWNPAMWN 540 WDSRRFTANA QPHLQPVLEP ETPRDMDEDA ETLTLRLGGG LFDEEQPPPP PPQLPPQPVA 600 RPNKRVRSGS PGNHPMCQVD DCKVLLTEAK DYHRRHKVCE LHSKTAKALV ANQMQRFCQQ 660 CSRYPSLESL PPLRLRCSIG FASESTYPGR FHPLSEFDEG KRSCRRRLAG HNRRRRKTQP 720 EDSASRLSVP ANLDNNGNGN VDILSLLTIL ARLQGKSTDK VGSSAPDKDH LAQILSKINS 780 LPAPNSSSMA NVPKGLDLNA ALVSQLPASE QQNKPNSHQS STSSTMDLLT AFSTALANSS 840 PDTSLGAVSQ GSSNCSAVDN TSAGQLQPAT GANLLAKPIQ VPASVGAARS SSTLQSSVEV 900 SDHQEREVEP SLPLQLFSSS AEDDSPPKFG GSSVKYLSSE SSNPMDEQSP SSSPPIAQKL 960 FPLQSEHKNL TNERMMPVCR KEDVMVEAST SAGWKAPLNL FKGPERQAEN QADPSLTSHA 1020 SYAFSSVPIH SDRQDRTGRI IFKLFDKDPS NFPVTLRTQI LDWLSHFPSE MESYIRPGCV 1080 VLSIYISMPS VAWDELEDNL VQRVMSLIQH VDSDFWQSGR FLVQTNKQLA SHKDDKVRLC 1140 KSWSTWIAPE LTSVSPLAVV SGKETSLVLK GRNLTLPGTM IYCTYMGGYT SKEVLGSTHP 1200 GTLYDDSSTE SFDFHGGPPK SFGRCFIEVE KGFKGNSFPL IIADDAICQE LRALESELEQ 1260 ETTLTDTISE DXSTPNSRED ILHFLNELGW LFQKKSSSSL LVEFSTTRFR FLLAFSVEHD 1320 WPALVKTLLD MLVERSSMGD ELVQESLEIL LEIHLLAKAV KRGCRNMVNL LLNYSVEVDS 1380 SNGSKIYLFP PNSSGPGGVT PLHLAACMQN SADMVDALTN DPQEIGLRCW NSILDDSGHS 1440 PFAYALMRNN HAYNKLVARK LVDRQNGQVS IAVGNDETSL DKSWIIEDHD EPRSHPMQVS 1500 SCARCVMMET VRVKRIVHTR GLLERPYIHS MLAIAAVCVC VCLFLRGLPD IGSVAPFKWE 1560 NLDYGPR

Sequence ? help Back to Top

Protein Sequence Length: 1567 aa Download sequence

MAPLLTQSVS SHPSLSRHCS CHALRHKASR PVFKASWQEL TGVLVFSAIP FTAVKAIANS  60
SLGEKLRKRL EETKREAVDG SSRFRAQAQR AREDSFWYGA ERPRWLGPIP FEYPSYLTGE  120
YPGDYGFDIA GLGRDSASFQ KYFNFEILHA RWAMLAALGV VIPELLDMQG LVHFVEPVWW  180
KVGYAKLQVP YFFLXQGDTL DYLGIPGFHI AGSQGIIVIA ICQVLLMVGP EYARYCGIEA  240
LEPLGIYLPG DINYPGGFLF DPLGLSKDPV SFEDLKVKEI KNGRLAMVAW LGFYLQAALT  300
GKVLAGMYIR HTGIQLNVSL CHAGFSSLST TCGCGRSPFL PSIPPPLSNS GIVLRYRPCH  360
VSFIETNDVA IVVDLVLLQL QLQLQLGSGV VASVLLDSWF LLSLSWTIEI SRIVSESGNG  420
IKATISVVLV LAAWRGFSYL SHSCHFDPAD CATPLLDRPP SYSFYITNES AGSLLDCSRP  480
RSMEAEVGSS AMFLHHHHHH DVPAAAKKRD FSWSSSSSSP SPAFLYNQHL SGDWNPAMWN  540
WDSRRFTANA QPHLQPVLEP ETPRDMDEDA ETLTLRLGGG LFDEEQPPPP PPQLPPQPVA  600
RPNKRVRSGS PGNHPMCQVD DCKVLLTEAK DYHRRHKVCE LHSKTAKALV ANQMQRFCQQ  660
CSRYPSLESL PPLRLRCSIG FASESTYPGR FHPLSEFDEG KRSCRRRLAG HNRRRRKTQP  720
EDSASRLSVP ANLDNNGNGN VDILSLLTIL ARLQGKSTDK VGSSAPDKDH LAQILSKINS  780
LPAPNSSSMA NVPKGLDLNA ALVSQLPASE QQNKPNSHQS STSSTMDLLT AFSTALANSS  840
PDTSLGAVSQ GSSNCSAVDN TSAGQLQPAT GANLLAKPIQ VPASVGAARS SSTLQSSVEV  900
SDHQEREVEP SLPLQLFSSS AEDDSPPKFG GSSVKYLSSE SSNPMDEQSP SSSPPIAQKL  960
FPLQSEHKNL TNERMMPVCR KEDVMVEAST SAGWKAPLNL FKGPERQAEN QADPSLTSHA  1020
SYAFSSVPIH SDRQDRTGRI IFKLFDKDPS NFPVTLRTQI LDWLSHFPSE MESYIRPGCV  1080
VLSIYISMPS VAWDELEDNL VQRVMSLIQH VDSDFWQSGR FLVQTNKQLA SHKDDKVRLC  1140
KSWSTWIAPE LTSVSPLAVV SGKETSLVLK GRNLTLPGTM IYCTYMGGYT SKEVLGSTHP  1200
GTLYDDSSTE SFDFHGGPPK SFGRCFIEVE KGFKGNSFPL IIADDAICQE LRALESELEQ  1260
ETTLTDTISE DXSTPNSRED ILHFLNELGW LFQKKSSSSL LVEFSTTRFR FLLAFSVEHD  1320
WPALVKTLLD MLVERSSMGD ELVQESLEIL LEIHLLAKAV KRGCRNMVNL LLNYSVEVDS  1380
SNGSKIYLFP PNSSGPGGVT PLHLAACMQN SADMVDALTN DPQEIGLRCW NSILDDSGHS  1440
PFAYALMRNN HAYNKLVARK LVDRQNGQVS IAVGNDETSL DKSWIIEDHD EPRSHPMQVS  1500
SCARCVMMET VRVKRIVHTR GLLERPYIHS MLAIAAVCVC VCLFLRGLPD IGSVAPFKWE  1560
NLDYGPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	Dr14171.1