PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14599.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

YABBY

Protein Properties

Length: 183aa MW: 20138.9 Da PI: 9.0087

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14599.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	150.2	1.9e-46	2	151	2	162
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 ++++s+e++Cyv+C++Cnt+lav vP + l+ +vtv+CGhC +l ++ + + l+++s s +++++ ++ + + +++s++ ++++ Dr14599.1 2 ELVNSTEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNHLSFLSPRSLLHSLSSSSS--SSDHPHIT---------FQGTCSDCRKSSNQLPQSSS 90 67899**********************************99888777777777777775..33334433.........22233333333444444444 PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s+++d ++p +p v++PPek+ r Psaynrf+keeiqrika+ P+i hreafs+aaknWa Dr14599.1 91 STSTDPSTPSAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAEKPNIPHREAFSMAAKNWAK 151 6677888999999*********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MELVNSTEHL CYVRCTYCNT VLAVGVPCKR LMDTVTVKCG HCNHLSFLSP RSLLHSLSSS 60 SSSSDHPHIT FQGTCSDCRK SSNQLPQSSS STSTDPSTPS APFVVKPPEK KHRLPSAYNR 120 FMKEEIQRIK AEKPNIPHRE AFSMAAKNWA KCDPRASTAA SSSVKERPES ANGFIIESLN 180 ALK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-44	YABBY family protein

Link Out ? help Back to Top
Ensembl	Dr14599.1