PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14793.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 243aa    MW: 27131.6 Da    PI: 5.1058
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14793.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.53.4e-161167154
        NAM  1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkae 54
               lppGfrFhP+deelv++yL+kk+++++    ++   ++ ++d++k+ePwdLp+  + e
  Dr14793.1 11 LPPGFRFHPRDEELVCDYLAKKIATETqdggFHSCPMMIDIDLNKCEPWDLPEP-RRE 67
               79*********************9999777744446799************942.222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSFLSMMESK LPPGFRFHPR DEELVCDYLA KKIATETQDG GFHSCPMMID IDLNKCEPWD  60
LPEPRREEKP IGLCMSSEWK EKSHNYQNVI ASVVHLLTID LFACMHGKNI KQDDWVLCRV  120
FYKSRGMAFN KQGGGGGVGG VLMEPCFDET SSSSTLPTLV DNFITFDQQS PLMVFGGCDQ  180
VPCFSTPPFP NLATTPTHTP SMAHESCEDK KVIKVVLBHL TKTSILGDGY LSESGLSSMW  240
NSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.11e-25NAC family protein