PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14854.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 259aa    MW: 28759 Da    PI: 5.1154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14854.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-135298354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               ++h e+E+rRR+ri+s +++Lr+ll  +     +K +Ka+ L kAve++++L
  Dr14854.1 52 KNHREAEKRRRERIKSHMDRLRTLLACD-----PKTDKASLLAKAVEHVRDL 98
               78*************************8.....7****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MYGGLSESNA GDMGLSPAPG PPGGIPSYFM ASFYPMDXTM DAPLDRALLA SKNHREAEKR  60
RRERIKSHMD RLRTLLACDP KTDKASLLAK AVEHVRDLKQ RTAEIAETQL FPSESDEIIV  120
IPGDELSSSD GRRLVYKASL CCEDRSDLLP ELIDTLRALR LKTLRAEMAT LGGRVRNVLV  180
LAGDSEGHQE DDAGAGGFLK DALKELVDRR TVSGDRLKRR RTVDRDSFSS SSSSSSFVLY  240
YDKYDDDDDD DYRAMVSNV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215221DRLKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.14e-44bHLH family protein