PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14893.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 311aa    MW: 34251.9 Da    PI: 9.3241
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14893.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.96.4e-56121391128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrFhP+deelv++yL++k++++k+++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++s+ ++el
  Dr14893.1  12 LPPGFRFHPSDEELVTYYLTNKISDSKFTA-RAIADVDLNKSEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFSSnSSEL 110
                79*************************999.89***************99999****************************************9967778 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 g+kktLvfykgrap+gekt+Wvmheyrl
  Dr14893.1 111 LGMKKTLVFYKGRAPRGEKTNWVMHEYRL 139
                ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEGGEGVKEE TLPPGFRFHP SDEELVTYYL TNKISDSKFT ARAIADVDLN KSEPWDLPGK  60
AKMGEKEWYF FSLRDRKYPT GVRTNRATNA GYWKTTGKDK EIFSSNSSEL LGMKKTLVFY  120
KGRAPRGEKT NWVMHEYRLP SKSPLKPNKD EWVACRVFMK SSGGKKYPSG QPRTHSYSLN  180
MGPGFAPPLN QADLYNFGFG AGYLSNAELA ELTRFARGTP GVLPPIQPQL NFPGVAAFSG  240
LNLNLGVPPA QPQGFRSMPA TVGQAQGVVG EVAPAVPSEC ILSGNAGSLN GVRFQNMEPC  300
MDLLEGYWPS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-100NAC family protein