PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr14908.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 210aa MW: 23811 Da PI: 4.6488

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr14908.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.2	3.9e-15	58	104	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +Er+RR+++N+++ Lr+l+P+ +Kl+Ka+i + A++YIk Lq Dr14908.1 58 KNIVMERNRRRKLNDRLYALRSLVPTI-----TKLDKASIIKDAIDYIKVLQ 104 56679*******************7.....6**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MEGYDDYQYW PFFDNDHDQF VESLAFDEEQ QPIFSHSQCY DSSSPEGGGA SPPSSATKNI 60 VMERNRRRKL NDRLYALRSL VPTITKLDKA SIIKDAIDYI KVLQGQEKQM LADMNETLKL 120 SEREDKGKLV ITDEMQVLTV NPFLIINPSK KPRTKIMRSS SYSPSSSAAV VSPTIEIIEI 180 DGMNCYQMEK MIRSAIEEVD NATSPMSMSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.3	2e-21	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr14908.1