PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15035.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 364aa MW: 41207.1 Da PI: 5.1434

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15035.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.6e-52	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtd+elv +yLk+kv+g k+el evi+ +d+yk++PwdLp k + +++ ew+fF++rd+ky++g+r+nrat+sgyWkatgkd+++++ + + Dr15035.1 6 LPPGFRFHPTDDELVGYYLKRKVDGLKIEL-EVIPVIDLYKCDPWDLPdKsFLPKRDLEWFFFCPRDRKYPNGSRTNRATASGYWKATGKDRKIVC-EPS 103 79**************************.99**********96434445667**********************************.889 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + lkktLvfy grap ge+tdWvmheyrl Dr15035.1 104 VAALKKTLVFYLGRAPGGERTDWVMHEYRL 133 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MSHMSLPPGF RFHPTDDELV GYYLKRKVDG LKIELEVIPV IDLYKCDPWD LPDKSFLPKR 60 DLEWFFFCPR DRKYPNGSRT NRATASGYWK ATGKDRKIVC EPSVAALKKT LVFYLGRAPG 120 GERTDWVMHE YRLCEDHFHG AYNFVGAYAL CRVVKRHEHX QKLGDLQGEH RSKKVDLTPX 180 TGAIGSSKYF GEVLNVSEDN HSPESSIFKE NNNLATITSP DSGIRTEQAL IVTEIDQTSF 240 QVPVPSVLPS NALKDMDHSV YEGIMDHSTL PNEFPNLTPV SSYASFSEDS FLVDELNGNV 300 CLSPFPSPIH CMGMYSNEEN IALAYMNAPF SEMNTWNAVM PPVICRQASE EEVNLWLVED 360 NLVM

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MSHMSLPPGF RFHPTDDELV GYYLKRKVDG LKIELEVIPV IDLYKCDPWD LPDKSFLPKR  60
DLEWFFFCPR DRKYPNGSRT NRATASGYWK ATGKDRKIVC EPSVAALKKT LVFYLGRAPG  120
GERTDWVMHE YRLCEDHFHG AYNFVGAYAL CRVVKRHEHX QKLGDLQGEH RSKKVDLTPX  180
TGAIGSSKYF GEVLNVSEDN HSPESSIFKE NNNLATITSP DSGIRTEQAL IVTEIDQTSF  240
QVPVPSVLPS NALKDMDHSV YEGIMDHSTL PNEFPNLTPV SSYASFSEDS FLVDELNGNV  300
CLSPFPSPIH CMGMYSNEEN IALAYMNAPF SEMNTWNAVM PPVICRQASE EEVNLWLVED  360
NLVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	4e-85	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr15035.1