PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15109.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 169aa    MW: 18745 Da    PI: 5.8429
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15109.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.4e-2167116255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+W+AeIrdp+    +  r +lg+f+taeeAa+a++ a+ +++g
  Dr15109.1  67 KYRGVRQRP-WGKWAAEIRDPV----KaVRKWLGTFDTAEEAARAYDSAAIRFRG 116
                8********.**********64....55************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MVSTLINVIS GNVSDTTITS ATQAFTLQQL PVGDTCHQCG IEKCLGCDLF VDAEEHGEQI  60
KRKKKNKYRG VRQRPWGKWA AEIRDPVKAV RKWLGTFDTA EEAARAYDSA AIRFRGPRAK  120
LNFPFPEGLQ GEERRDEEGI WDGLQDLFTL DSGSGSGFEL DRPPPASSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16067IKRKKKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-26ERF family protein