PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15118.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 187aa    MW: 21492.6 Da    PI: 6.8998
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15118.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09103143954
                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Dr15118.1 103 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 143
                699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MEVDYLNSSQ ESQMELMTMM MEMEKLTELS NAPVGQHNYP LIPHPPTVNN VVVYEDQQPS  60
VDSMREMIFR MAAMQPVYID PETVKPPKRK NVRISKDPQS VAARHRRERI SERIRILQRL  120
VPGGTKMDTA SMLDEAIHYV KFLKNQVQSL ERAAAHRSLA EHTGAGGEFS VSNYGYQDYM  180
NHNQMIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-40bHLH family protein