PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15127.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 465aa    MW: 51472.7 Da    PI: 6.0353
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15127.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS277.83.4e-85814562373
       GRAS   2 velLlecAeavss.....gdlelaqalLarlsel...aspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                 +lL++ Aea+s      +++ la+ +Larl+el   +s+ +  ++m+ la +ft+AL++  +          + s+ ++    + l+a++l++++sP++
  Dr15127.1  81 LHLLMASAEALSGptnkgKSNDLAKVILARLKELlvwSSEIRspTNMESLALHFTKALESLTHV---------SISHGNTAGAGNFLTAFQLLQDMSPYI 171
                6899999999987555445666***********9886444443579************998776.........3444444457899************** PP

       GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                kf+h+taNqaI e+v+ ++r+HiiD+di++G+QW+aL+q L s++   +pp+lR+T+++++  ++  +++etg+rL +fA+++g pf+f+    ++ ++l
  Dr15127.1 172 KFGHFTANQAIIESVACDRRIHIIDYDIMEGVQWAALMQDLVSKNdgLPPPHLRVTALARAGGKQVINVQETGRRLIDFANSIGQPFSFSQCRLDSSDKL 271
                *********************************************555699*********8888***************************9999***** PP

       GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvEr 287
                  +++++ +gEal+Vn++ +l + +++s+++ s   ++++lv slsP++++vve+e +    +e F  rf + l+ ysa+ dslea++p +  +r +vE+
  Dr15127.1 272 CASRIKLVKGEALVVNIMRHLPHSPHRSQTSMS---SIISLVASLSPRLITVVEEENEEmeKGEGFILRFRQVLHRYSAVWDSLEAGFPMQRIARGMVEN 368
                *******************99999987777777...9******************9776567889*********************************** PP

       GRAS 288 ellgreivnvvacegaerrer..hetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
                +l+g++i + v ++ +++ e+  +e+     e+l+ aGF+p ++s ++ +qa+ll   ++ +gyrvee+  + +vlgWk+rpL+ +S+W
  Dr15127.1 369 VLFGPRIAEDVKMAFERSDEEmeMEKEIGVAEKLNVAGFRPGKISFFNHCQARLLAGLFH-EGYRVEEKgVNKIVLGWKSRPLLLASVW 456
                ********999776666555500555556799****************************.******98568899************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MMEVVMEEGG DISGCSSTTT TTIDDDLNYA LADWSPLIVH SPMFSGTNNL PSVIETIIDK  60
NTPKEEXGVE EEEDNKGLRL LHLLMASAEA LSGPTNKGKS NDLAKVILAR LKELLVWSSE  120
IRSPTNMESL ALHFTKALES LTHVSISHGN TAGAGNFLTA FQLLQDMSPY IKFGHFTANQ  180
AIIESVACDR RIHIIDYDIM EGVQWAALMQ DLVSKNDGLP PPHLRVTALA RAGGKQVINV  240
QETGRRLIDF ANSIGQPFSF SQCRLDSSDK LCASRIKLVK GEALVVNIMR HLPHSPHRSQ  300
TSMSSIISLV ASLSPRLITV VEEENEEMEK GEGFILRFRQ VLHRYSAVWD SLEAGFPMQR  360
IARGMVENVL FGPRIAEDVK MAFERSDEEM EMEKEIGVAE KLNVAGFRPG KISFFNHCQA  420
RLLAGLFHEG YRVEEKGVNK IVLGWKSRPL LLASVWSSPV RSLGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-111GRAS family protein