PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15135.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 70aa    MW: 8111.42 Da    PI: 10.4667
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15135.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.6e-082371247
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++ + ++lG+g+W+ Ia+ +   Rt+ q+ s+ qky
        Dr15135.1  2 FLLGLQKLGKGDWHGIAHNFVVSRTPTQVASHAQKY 37
                     566789*****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
MFLLGLQKLG KGDWHGIAHN FVVSRTPTQV ASHAQKYFIQ QTNVTRRKRR SSLFNMVPEM  60
PMDELPVLEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-32MYB_related family protein