PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15230.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HB-other
Protein Properties Length: 306aa    MW: 34740.4 Da    PI: 6.6172
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.44.4e-0733752456
               S--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS
   Homeobox 24 ypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56
                ps+e++  LA+k            ++ +qV +WFqNrR+ ++
  Dr15230.1 33 IPSREAICALAAKFsasadrvgkxVVQPKQVWNWFQNRRYAQR 75
               49999999999999999999999999*************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGRLPHGGGP VFRFTSGEVV EMEIMLQDLN YVIPSREAIC ALAAKFSASA DRVGKXVVQP  60
KQVWNWFQNR RYAQRTKLIK PPEKSSTTPV PQDDIVSSTN LVDFFSFPSG FISPDTMQME  120
FEAKSARDNA WYDVSAFIGL RVGETGDLEV RVNFSGFSIE EDEWVNVHKC VRQRSLPCEA  180
SECVVVLPGD LVLCFQVLPF MMILSELVFG QLQEGKEQAL YFDAHVLDAQ RRRHDVRGCR  240
CRFLVRYDHD QSEEIVPLRK VCRRPGTDYR LRGRTLGHVD QHAMAMDSTL AAFPNDPDLK  300
ACQPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.13e-96HB-other family protein